BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019E03LP1|AL427490
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1870 0.0
>3x_Contig1542
Length = 13810
Score = 1870 bits (942), Expect = 0.0
Identities = 965/970 (99%), Gaps = 3/970 (0%)
Strand = Plus / Minus
Query: 1 gatccaacttgtgatcaaactgggaaatcttatggtcatggcaaggaatttcgccatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9028 gatccaacttgtgatcaaactgggaaatcttatggtcatggcaaggaatttcgccatcaa 8969
Query: 61 aactctgtcttgaggcgtgatggtatgacaattcctgatcaacctcaggtccaagtatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8968 aactctgtcttgaggcgtgatggtatgacaattcctgatcaacctcaggtccaagtatta 8909
Query: 121 ggacaagggcaatggcctgcaggc-attacggcatgggggagcttaacttgagacatcct 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8908 ggacaagggcaatggcctgcaggccattacggcatgggggagcttaacttgagacatcct 8849
Query: 180 actcatttcgatttccatgacaaaccattgactgatcaagaagcatttgaagaggacaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8848 actcatttcgatttccatgacaaaccattgactgatcaagaagcatttgaagaggacaaa 8789
Query: 240 acaagattctaccgttggcacattgattctgcattatatgcactatcacctccagtggtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8788 acaagattctaccgttggcacattgattctgcattatatgcactatcacctccagtggtc 8729
Query: 300 acaactttgttaggtattcacgttccaccagaatccagaaaacagaagatccattatgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8728 acaactttgttaggtattcacgttccaccagaatccagaaaacagaagatccattatgat 8669
Query: 360 gatactggtgatgtattggaagtaactcaaggtgctactagctttgtgtctggtgctaac 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8668 gatactggtgatgtattggaagtaactcaaggtgctactagctttgtgtctggt-ctaac 8610
Query: 420 gcctttgacttactatctgaagaggatcaacaacgtgctttgaaaacaacagttgtgtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8609 gcctttgacttactatctgaagaggatcaacaacgtgctttgaaaacaacagttgtgtat 8550
Query: 480 gcaccacatccttatatcttcatttctcctgccagagcaacatcagatggtttaactatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8549 gcaccacatccttatatcttcatttctcctgccagagcaacatcagatggtttaactatg 8490
Query: 540 gtttcagatgggaaggaaatgaaatttgaagatctacctccatgggaggaatctaagatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8489 gtttcagatgggaaggaaatgaaatttgaagatctacctccatgggaggaatctaagatt 8430
Query: 600 aaacgtttacctttagtgtggactaatccagtgactaagaagcaccatttacaagtccat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8429 aaacgtttacctttagtgtggactaatccagtgactaagaagcaccatttacaagtccat 8370
Query: 660 ggttgttgtattcatcaacttgaattgccagatggaactgttctagatttggaagacgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8369 ggttgttgtattcatcaacttgaattgccagatggaactgttctagatttggaagacgct 8310
Query: 720 cgtaaggaagtttacagaatgatgagaccagccatttcaccagatcaagtgtatgctcac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8309 cgtaaggaagtttacagaatgatgagaccagccatttcaccagatcaagtgtatgctcac 8250
Query: 780 gcatgggacaaaggtgatctagtcatcttccataacaggggtgtttggcattctgttact 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8249 gcatgggacaaaggtgatctagtcatcttccataacaggggtgtttggcattctgttact 8190
Query: 840 ggtcaatttaaggagggagaaaagagattgatgcaccaatgtaacatcgcttccggtata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8189 ggtcaatttaaggagggagaaaagagattgatgcaccaatgtaacatcgcttccggtata 8130
Query: 900 gatccagtyaccgtcctttaaaattgtacataaaattataacatttggtaata-tyccta 958
|||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 8129 gatccagtcaccgtcctttaaaattgtacataaaattataacatttggtaatattcccta 8070
Query: 959 attaagttgt 968
||||||||||
Sbjct: 8069 attaagttgt 8060
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6641
Number of Sequences: 1807
Number of extensions: 6641
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)